{ "_id": "6ad5cf897f75c4fbd3a1e872", "Package": "malariaEquilibrium", "Type": "Package", "Title": "Return equilibrium solution to malaria transmission model", "Version": "1.0.1", "Authors@R": "c(\nperson(\ngiven = \"Bob\",\nfamily = \"Verity\",\nrole = c('aut', 'cre'),\nemail = 'r.verity@imperial.ac.uk'\n),\nperson(\ngiven = \"Pete\",\nfamily = \"Winskill\",\nrole = c('aut'),\nemail = 'p.winskill@imperial.ac.uk'\n),\nperson(\ngiven = \"Giovanni\",\nfamily = \"Charles\",\nrole = c('aut'),\nemail = 'giovanni.charles@gmail.com'\n))", "Description": "Often we are interested in the state of a given malaria\ntransmission model at equibrium. However, some models (e.g. the\nGriffin et al. 2014 model) are quite complex, and can result in\nequilibrium solutions that are fairly in-depth. In these\nsituations it is useful to have a \"canonical\" equilibrium\nsolution that is tried and tested, and can be used reliably by\nmultiple users. This package aims to be a place for hosting\nthese canonical solutions, and for storing useful tests, checks\nand plotting functions for exploring a given solution.", "License": "MIT + file LICENSE", "Encoding": "UTF-8", "RoxygenNote": "7.0.2", "BugReports": "https://github.com/mrc-ide/malariaEquilibrium/issues", "Repository": "https://mrc-ide.r-universe.dev", "Date/Publication": "2022-01-12 17:05:32 UTC", "RemoteUrl": "https://github.com/mrc-ide/malariaEquilibrium", "RemoteRef": "master", "RemoteSha": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "NeedsCompilation": "no", "Packaged": { "Date": "2026-10-19 08:01:23 UTC", "User": "root" }, "Author": "Bob Verity [aut, cre],\nPete Winskill [aut],\nGiovanni Charles [aut]", "Maintainer": "Bob Verity ", "_user": "mrc-ide", "_type": "src", "_file": "malariaEquilibrium_1.0.1.tar.gz", "_fileid": "https://r2.ropensci.org/9a2cce123192ab750776f1ff6a50dcd28a660234ca1807822a5303cb07c8a7e2", "_filesize": 113947, "_sha256": "9a2cce123192ab750776f1ff6a50dcd28a660234ca1807822a5303cb07c8a7e2", "_expires": "2027-01-27T08:06:31.000Z", "_created": "2026-10-19T08:01:23.000Z", "_published": "2026-10-19T08:06:33.586Z", "_buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118", "_status": "success", "_host": "GitHub-Actions", "_jobs": [ { "job": 117952357062, "time": 119, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "12171536005" }, { "job": 117952357189, "time": 81, "config": "linux-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "12171650564" }, { "job": 117952357076, "time": 100, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "NOTE", "artifact": "12171505981" }, { "job": 117952357191, "time": 101, "config": "macos-release-arm64", "r": "4.6.1", "check": "NOTE", "artifact": "12171302246" }, { "job": 117951339169, "time": 164, "config": "source", "r": "4.6.1", "check": "OK", "artifact": "12171970021" }, { "job": 117952357038, "time": 114, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "12170923775" }, { "job": 117952357083, "time": 76, "config": "windows-devel-x86_64", "r": "4.7.0", "check": "NOTE", "artifact": "12171237393" }, { "job": 117952357298, "time": 54, "config": "windows-oldrel-x86_64", "r": "4.5.3", "check": "NOTE", "artifact": "12170174938" }, { "job": 117952357124, "time": 84, "config": "windows-release-x86_64", "r": "4.6.1", "check": "NOTE", "artifact": "12171197793" } ], "_upstream": "https://github.com/mrc-ide/malariaEquilibrium", "_commit": { "id": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "author": "Giovanni ", "committer": "GitHub ", "message": "Merge pull request #5 from mrc-ide/odin\n\nChanges to make malariaEquilibrium play nice with the odin model", "time": 1642007132 }, "_maintainer": { "name": "Bob Verity", "email": "r.verity@imperial.ac.uk", "login": "bobverity", "description": "", "uuid": 9216594 }, "_distro": "resolute", "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 3.5.0", "role": "Depends" }, { "package": "statmod", "role": "Imports" }, { "package": "magrittr", "role": "Imports" } ], "_owner": "mrc-ide", "_selfowned": true, "_usedby": 1, "_updates": [], "_tags": [], "_stars": 3, "_contributors": [ { "user": "bobverity", "count": 13, "uuid": 9216594 }, { "user": "giovannic", "count": 12, "uuid": 2605711 } ], "_userbio": { "uuid": 25453642, "type": "organization", "name": "MRC Centre for Global Infectious Disease Analysis", "followers": 164, "description": "MRC Centre hosted within the Department of Infectious Disease Epidemiology at Imperial College London" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/malariaEquilibrium" }, "_devurl": "https://github.com/mrc-ide/malariaequilibrium", "_searchresults": 58, "_rbuild": "4.6.1", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/malariaEquilibrium.html", "extra/manual.pdf", "extra/readme.html", "extra/readme.md", "LICENSE" ], "_cranurl": false, "_exports": [ "%>%", "gq_normal", "human_equilibrium", "human_equilibrium_no_het", "load_parameter_set", "malariaEq_file" ], "_help": [ { "page": "gq_normal", "title": "Gaussian quadrature of normal density", "topics": [ "gq_normal" ] }, { "page": "human_equilibrium", "title": "Equilibrium solution", "topics": [ "human_equilibrium" ] }, { "page": "human_equilibrium_no_het", "title": "Equilibrium solution without biting heterogeneity", "topics": [ "human_equilibrium_no_het" ] }, { "page": "load_parameter_set", "title": "Laod a Parameter Set from File", "topics": [ "load_parameter_set" ] }, { "page": "malariaEq_file", "title": "Load sytem file for this package", "topics": [ "malariaEq_file" ] }, { "page": "malariaEquilibrium", "title": "malariaEquilibrium", "topics": [ "malariaEquilibrium" ] } ], "_readme": "https://github.com/mrc-ide/malariaEquilibrium/raw/master/README.md", "_rundeps": [ "magrittr", "statmod" ], "_score": 3.416640507338281, "_indexed": true, "_nocasepkg": "malariaequilibrium", "_universes": [ "mrc-ide", "bobverity" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "1.0.1", "date": "2026-10-19T08:03:30.000Z", "distro": "resolute", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/d53cd2081b63720836f04186f8ce12a6aaa6a788875fffe181c29220e1ff7a55", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" }, { "r": "4.6.1", "os": "linux", "version": "1.0.1", "date": "2026-10-19T08:02:52.000Z", "distro": "resolute", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/addbb4cdcbfd45c92f72287a247776b4d36d47808f312e02813a5371bcf61bc3", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" }, { "r": "4.5.3", "os": "mac", "version": "1.0.1", "date": "2026-10-19T08:05:07.000Z", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/296be99a972ea05cf367102f755413df241579fe5c89d97a780ef66ca718ef5d", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" }, { "r": "4.6.1", "os": "mac", "version": "1.0.1", "date": "2026-10-19T08:05:46.000Z", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/da640b8ed09b5d574bb0e105efdb7489a59cf04874169b6c5d933e4fc7f8e83e", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" }, { "r": "4.6.0", "os": "wasm", "version": "1.0.1", "date": "2026-10-19T08:03:32.000Z", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/d7e7676d157913273542cbaeadba5e4bc2d9db5a6366451d81805cb974ffeb50", "status": "success", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" }, { "r": "4.7.0", "os": "win", "version": "1.0.1", "date": "2026-10-19T08:02:41.000Z", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/e7aa1e8e914213c2e2f1934b76acf555abc176a7478f0b629c85363a4d05dccc", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" }, { "r": "4.5.3", "os": "win", "version": "1.0.1", "date": "2026-10-19T08:02:22.000Z", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/8eb6062d5f006ce74e917d80961fb6a23df4665622908f02a6b957fd41bc866d", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" }, { "r": "4.6.1", "os": "win", "version": "1.0.1", "date": "2026-10-19T08:02:52.000Z", "commit": "c929c1c2e3de47e5995d4bd5ea6c7b39f48f128c", "fileid": "https://r2.ropensci.org/7e5d433b126b58cb4a09a48f6d00dd170cd4b3927f486c4c225df898189a7991", "status": "success", "check": "NOTE", "buildurl": "https://github.com/r-universe/mrc-ide/actions/runs/39219480118" } ] }