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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "dust" in publications use:'
type: software
license: MIT
title: 'dust: Iterate Multiple Realisations of Stochastic Models'
version: 0.15.3
doi: 10.12688/wellcomeopenres.16466.2
identifiers:
- type: doi
  value: 10.32614/CRAN.package.dust
abstract: An Engine for simulation of stochastic models. Includes support for running
  stochastic models in parallel, either with shared or varying parameters. Simulations
  are run efficiently in compiled code and can be run with a fraction of simulated
  states returned to R, allowing control over memory usage. Support is provided for
  building bootstrap particle filter for performing Sequential Monte Carlo (e.g.,
  Gordon et al. 1993 <https://doi.org/10.1049/ip-f-2.1993.0015>). The core of the
  simulation engine is the 'xoshiro256**' algorithm (Blackman and Vigna <arXiv:1805.01407>),
  and the package is further described in FitzJohn et al 2021 <https://doi.org/10.12688/wellcomeopenres.16466.2>.
authors:
- family-names: FitzJohn
  given-names: Rich
  email: rich.fitzjohn@gmail.com
- family-names: Hill
  given-names: Alex
- family-names: Lees
  given-names: John
preferred-citation:
  type: article
  title: Reproducible parallel inference and simulation of stochastic state space
    models using odin, dust, and mcstate
  authors:
  - family-names: FitzJohn
    given-names: Richard G.
  - family-names: Knock
    given-names: Edward S.
  - family-names: Whittles
    given-names: Lilith K.
  - family-names: Perez-Guzman
    given-names: Pablo N.
  - family-names: Bhatia
    given-names: Sangeeta
  - family-names: Guntoro
    given-names: Fernando
  - family-names: Watson
    given-names: Oliver J.
  - family-names: Whittaker
    given-names: Charles
  - family-names: Ferguson
    given-names: Neil M.
  - family-names: Cori
    given-names: Anne
  - family-names: Baguelin
    given-names: Marc
  - family-names: Lees
    given-names: John A.
  journal: Wellcome Open Research
  year: '2021'
  volume: '5'
  doi: 10.12688/wellcomeopenres.16466.2
  start: '288'
repository: https://mrc-ide.r-universe.dev
repository-code: https://github.com/mrc-ide/dust
commit: 1bcce5f84c6b75e43eec89a290c94c5d5097af80
url: https://github.com/mrc-ide/dust
contact:
- family-names: FitzJohn
  given-names: Rich
  email: rich.fitzjohn@gmail.com