Package: jointlyr
Title: Joint estimation of initial incidence and reproduction number
Version: 0.0.1
Authors@R: 
      c(person(given = "Sangeeta", family = "Bhatia",
               role = c("aut", "cre"),
               email = "s.bhatia@imperial.ac.uk"),
               person(given = "Pierre", family = "Nouvellet",
                      role = c("aut"),
                      email = "p.nouvellet@imperial.ac.uk"),
               person(given = "Anne", family = "Cori",
                      role = c("aut"),
                      email = "a.cori@imperial.ac.uk"),
               person(given = "Jack", family = "Wardle",
                      role = c("aut"),
                      email = "j.wardle19@imperial.ac.uk"))           
Description: Provides a Stan implementation of a method to jointly
        estimate incidence and reproduction number.
License: MIT
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.1
Biarch: true
Depends: R (>= 3.4.0)
Imports: EpiEstim, methods, Rcpp (>= 0.12.0), RcppParallel (>= 5.0.1),
        rstan (>= 2.18.1), rstantools (>= 2.1.1)
LinkingTo: BH (>= 1.66.0), Rcpp (>= 0.12.0), RcppEigen (>= 0.3.3.3.0),
        RcppParallel (>= 5.0.1), rstan (>= 2.18.1), StanHeaders (>=
        2.18.0)
SystemRequirements: GNU make
Suggests: knitr, rmarkdown
VignetteBuilder: knitr
Config/pak/sysreqs: make libicu-dev libsodium-dev
Repository: https://mrc-ide.r-universe.dev
Date/Publication: 2022-08-03 16:20:29 UTC
RemoteUrl: https://github.com/mrc-ide/jointlyr
RemoteRef: master
RemoteSha: 614603f6c50f83d9c3305b51535eaeaebf276f6a
NeedsCompilation: yes
Packaged: 2026-05-25 06:12:39 UTC; root
Author: Sangeeta Bhatia [aut, cre],
  Pierre Nouvellet [aut],
  Anne Cori [aut],
  Jack Wardle [aut]
Maintainer: Sangeeta Bhatia <s.bhatia@imperial.ac.uk>