Package: threemc Title: (Matt's) Multi-Level Model of Male Circumcision in Sub-Saharan Africa Version: 0.1.45 Authors@R: c(person(family = "Thomas", give = "Matthew", role = "aut", email = "m.l.thomas@exeter.ac.uk", comment = c(ORCID = "0000-0001-8171-1936")), person(family = "Imai-Eaton", given = "Jeffrey", role = "aut", email = "jeffrey.eaton@imperial.ac.uk", comment = c(ORCID = "0000-0001-7728-728X")), person(family = "O'Toole", given = "Patrick", role = "cre", email = "potoole@imperial.ac.uk", comment = c(ORCID = "0000-0002-1652-6555")), person(given = "Imperial College of Science, Technology and Medicine", role = "cph")) Description: Functions and datasets to support, and extend to other Sub-Saharan African countries, Thomas, M. et. al., 2021, A multi-level model for estimating region-age-time-type specific male circumcision coverage from household survey and health system data in South Africa, . Depends: R (>= 3.5.0) LazyData: true License: MIT + file LICENSE Encoding: UTF-8 Roxygen: list(markdown = TRUE) RoxygenNote: 7.2.3 URL: https://github.com/mrc-ide/threemc BugReports: https://github.com/mrc-ide/threemc/issues Imports: dplyr (>= 1.0.7), sf (>= 1.0.5), rlang (>= 0.4.12), TMB (>= 1.7.22), Matrix (>= 1.3-4), spdep (>= 1.1.13), splines (>= 3.6.2), tidyr (>= 1.1.4), data.table (>= 1.14.2), R.utils (>= 2.11.0), mgcv (>= 1.8-38), stats, stringr (>= 1.4.0), methods (>= 3.6.2), loo (>= 2.5.1), mvtnorm (>= 1.1-3), scoringutils (>= 1.0.1) Suggests: covr (>= 3.5.1), tidyverse (>= 1.3.1), testthat (>= 3.0.0), knitr (>= 1.40), rmarkdown (>= 2.18), ggplot2 (>= 3.4.0), scales (>= 1.2.1), goodpractice (>= 1.0.4) LinkingTo: TMB (>= 1.7.22), RcppEigen (>= 0.3.3.9.1), Config/testthat/edition: 3 VignetteBuilder: knitr Config/pak/sysreqs: libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev libicu-dev libssl-dev libproj-dev libsqlite3-dev libudunits2-dev Repository: https://mrc-ide.r-universe.dev Date/Publication: 2024-02-06 15:55:02 UTC RemoteUrl: https://github.com/mrc-ide/threemc RemoteRef: master RemoteSha: e10f54bd54babb3a93daa2b31f1b10f56a540d1c NeedsCompilation: yes Packaged: 2026-06-15 09:10:53 UTC; root Author: Matthew Thomas [aut] (ORCID: ), Jeffrey Imai-Eaton [aut] (ORCID: ), Patrick O'Toole [cre] (ORCID: ), Imperial College of Science, Technology and Medicine [cph] Maintainer: Patrick O'Toole