Package: odin.dust 0.3.13

Rich FitzJohn

odin.dust: Compile Odin to Dust

Less painful than it sounds, this package compiles an odin model to use dust, our new stochastic model system. Supports only a subset of odin models (discrete time stochastic models with no interpolation and no delays).

Authors:Rich FitzJohn [aut, cre], Alex Hill [aut], John Lees [aut], Imperial College of Science, Technology and Medicine [cph]

odin.dust_0.3.13.tar.gz
odin.dust_0.3.13.zip(r-4.5)odin.dust_0.3.13.zip(r-4.4)odin.dust_0.3.13.zip(r-4.3)
odin.dust_0.3.13.tgz(r-4.5-any)odin.dust_0.3.13.tgz(r-4.4-any)odin.dust_0.3.13.tgz(r-4.3-any)
odin.dust_0.3.13.tar.gz(r-4.5-noble)odin.dust_0.3.13.tar.gz(r-4.4-noble)
odin.dust_0.3.13.tgz(r-4.4-emscripten)odin.dust_0.3.13.tgz(r-4.3-emscripten)
odin.dust.pdf |odin.dust.html
odin.dust/json (API)
NEWS

# Install 'odin.dust' in R:
install.packages('odin.dust', repos = c('https://mrc-ide.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mrc-ide/odin.dust/issues

On CRAN:

5.71 score 3 stars 122 scripts 1 mentions 4 exports 31 dependencies

Last updated 5 months agofrom:bb34b58b78 (on master). Checks:1 OK, 7 NOTE. Indexed: yes.

TargetResultLatest binary
Doc / VignettesOKJan 30 2025
R-4.5-winNOTEJan 30 2025
R-4.5-macNOTEJan 30 2025
R-4.5-linuxNOTEJan 30 2025
R-4.4-winNOTEJan 30 2025
R-4.4-macNOTEJan 30 2025
R-4.3-winNOTEJan 30 2025
R-4.3-macNOTEJan 30 2025

Exports:odin_dustodin_dust_odin_dust_optionsodin_dust_package

Dependencies:briocallrcinterpolateclicpp11decordescdeSolvedigestdustfansifsgluejsonlitelifecyclemagrittrodinpillarpkgbuildpkgconfigpkgloadprocessxpsR6ringrlangrprojroottibbleutf8vctrswithr

Porting from odin

Rendered fromporting.Rmdusingknitr::rmarkdownon Jan 30 2025.

Last update: 2023-09-26
Started: 2022-08-04

SIR models

Rendered fromsir_models.Rmdusingknitr::rmarkdownon Jan 30 2025.

Last update: 2022-11-08
Started: 2020-10-26

Readme and manuals

Help Manual

Help pageTopics
Create a dust odin modelodin_dust odin_dust_
Options for odin_dustodin_dust_options
Update package codeodin_dust_package