Package: rincewind 1.4.7
Sangeeta Bhatia
rincewind: Utilities for processing forecasts matrices
This package contains utility functions for processing forecasts matrices.
Authors:
rincewind_1.4.7.tar.gz
rincewind_1.4.7.zip(r-4.5)rincewind_1.4.7.zip(r-4.4)rincewind_1.4.7.zip(r-4.3)
rincewind_1.4.7.tgz(r-4.4-any)rincewind_1.4.7.tgz(r-4.3-any)
rincewind_1.4.7.tar.gz(r-4.5-noble)rincewind_1.4.7.tar.gz(r-4.4-noble)
rincewind_1.4.7.tgz(r-4.4-emscripten)rincewind_1.4.7.tgz(r-4.3-emscripten)
rincewind.pdf |rincewind.html✨
rincewind/json (API)
# Install 'rincewind' in R: |
install.packages('rincewind', repos = c('https://mrc-ide.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mrc-ide/rincewind/issues
- country_continent_mapping - Country to continent mapping
Last updated 2 years agofrom:4b8a5d8722 (on master). Checks:OK: 1 WARNING: 6. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Nov 20 2024 |
R-4.5-win | WARNING | Nov 20 2024 |
R-4.5-linux | WARNING | Nov 20 2024 |
R-4.4-win | WARNING | Nov 20 2024 |
R-4.4-mac | WARNING | Nov 20 2024 |
R-4.3-win | WARNING | Nov 20 2024 |
R-4.3-mac | WARNING | Nov 20 2024 |
Exports:age_wtd_ifrall_forecasts_calendarall_metricsalternating_paletteassign_epidemic_phaseassign_epidemic_phase2cap_predictionscontinent_colorscalecountry_to_continentcustomise_for_rowsdaily_to_weeklydeaths_thresholdempirical_probabilityextract_predictions_qntlsnice_country_nameoverlapsplot_projectionspoisson_probabilitypool_predictions_weightedrestimates_linegraphround_and_formatsave_multiplescale_date_manuscripttheme_manuscriptts_to_incid
Dependencies:assessraweekclicolorspacecpp11distributionaldplyrfansifarvergenericsggdistggplot2gluegtableincidenceisobandlabelinglatticelifecyclemagrittrMASSMatrixmgcvmunsellnlmenumDerivpillarpkgconfigpurrrquadprogR6RColorBrewerRcpprlangscalesslidersnakecasestringistringrtibbletidyrtidyselectutf8vctrsviridisLitewarpwithr
Readme and manuals
Help Manual
Help page | Topics |
---|---|
Age-weighted IFR of COVID-19 | age_wtd_ifr |
Assign epidemic phase | assign_epidemic_phase2 |
Cap predictions to twice the observed for visualisation | cap_predictions |
Country to continent mapping | country_continent_mapping |
Customise plots to be aligned in rows in the manuscript | customise_for_rows |
Check if two intervals overlap | overlaps |
projections plot with median and various quantiles | plot_projections |
Defines a date scale to be used for all figures. | scale_date_manuscript |
Convert time-series to incidence object | ts_to_incid |