Package: rincewind 1.4.7

Sangeeta Bhatia
rincewind: Utilities for processing forecasts matrices
This package contains utility functions for processing forecasts matrices.
Authors:
rincewind_1.4.7.tar.gz
rincewind_1.4.7.zip(r-4.7)rincewind_1.4.7.zip(r-4.6)rincewind_1.4.7.zip(r-4.5)
rincewind_1.4.7.tgz(r-4.6-any)rincewind_1.4.7.tgz(r-4.5-any)
rincewind_1.4.7.tar.gz(r-4.7-any)rincewind_1.4.7.tar.gz(r-4.6-any)
rincewind_1.4.7.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
rincewind/json (API)
| # Install 'rincewind' in R: |
| install.packages('rincewind', repos = c('https://mrc-ide.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mrc-ide/rincewind/issues
- country_continent_mapping - Country to continent mapping
Last updated from:4b8a5d8722 (on master). Checks:7 WARNING, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | WARNING | 142 | ||
| source / vignettes | OK | 156 | ||
| linux-release-x86_64 | WARNING | 130 | ||
| macos-release-arm64 | WARNING | 101 | ||
| macos-oldrel-arm64 | WARNING | 93 | ||
| windows-devel | WARNING | 87 | ||
| windows-release | WARNING | 92 | ||
| windows-oldrel | WARNING | 125 | ||
| wasm-release | OK | 104 |
Exports:age_wtd_ifrall_forecasts_calendarall_metricsalternating_paletteassign_epidemic_phaseassign_epidemic_phase2cap_predictionscontinent_colorscalecountry_to_continentcustomise_for_rowsdaily_to_weeklydeaths_thresholdempirical_probabilityextract_predictions_qntlsnice_country_nameoverlapsplot_projectionspoisson_probabilitypool_predictions_weightedrestimates_linegraphround_and_formatsave_multiplescale_date_manuscripttheme_manuscriptts_to_incid
Dependencies:assessraweekclicpp11distributionaldplyrfarvergenericsggdistggplot2gluegtableincidenceisobandlabelinglifecyclemagrittrnumDerivpillarpkgconfigpurrrquadprogR6RColorBrewerRcpprlangS7scalesslidersnakecasestringistringrtibbletidyrtidyselectutf8vctrsviridisLitewarpwithr
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Age-weighted IFR of COVID-19 | age_wtd_ifr |
| Assign epidemic phase | assign_epidemic_phase2 |
| Cap predictions to twice the observed for visualisation | cap_predictions |
| Country to continent mapping | country_continent_mapping |
| Customise plots to be aligned in rows in the manuscript | customise_for_rows |
| Check if two intervals overlap | overlaps |
| projections plot with median and various quantiles | plot_projections |
| Defines a date scale to be used for all figures. | scale_date_manuscript |
| Convert time-series to incidence object | ts_to_incid |