jeffeaton. To fix this you can add URL: https://mrc-ide.r-universe.dev/epp to the package DESCRIPTION file. See also theR-universe documentation.Package: epp 0.4.4
epp: R Implementation of the EPP model for HIV epidemic estimates.
This implements the EPP r-spline and r-trend models for HIV epidemic estimates.
Authors:
epp_0.4.4.tar.gz
epp_0.4.4.zip(r-4.7)epp_0.4.4.zip(r-4.6)epp_0.4.4.zip(r-4.5)
epp_0.4.4.tgz(r-4.6-x86_64)epp_0.4.4.tgz(r-4.6-arm64)epp_0.4.4.tgz(r-4.5-x86_64)epp_0.4.4.tgz(r-4.5-arm64)
epp_0.4.4.tar.gz(r-4.7-arm64)epp_0.4.4.tar.gz(r-4.7-x86_64)epp_0.4.4.tar.gz(r-4.6-arm64)epp_0.4.4.tar.gz(r-4.6-x86_64)
epp_0.4.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
epp/json (API)
NEWS
| # Install 'epp' in R: |
| install.packages('epp', repos = c('https://mrc-ide.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/jeffeaton/epp/issues
Last updated from:e23e99af80 (on master). Checks:11 WARNING, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-arm64 | WARNING | 117 | ||
| linux-devel-x86_64 | WARNING | 109 | ||
| source / vignettes | OK | 187 | ||
| linux-release-arm64 | WARNING | 115 | ||
| linux-release-x86_64 | WARNING | 108 | ||
| macos-release-arm64 | WARNING | 116 | ||
| macos-release-x86_64 | WARNING | 246 | ||
| macos-oldrel-arm64 | WARNING | 103 | ||
| macos-oldrel-x86_64 | WARNING | 150 | ||
| windows-devel | WARNING | 110 | ||
| windows-release | WARNING | 75 | ||
| windows-oldrel | WARNING | 123 | ||
| wasm-release | OK | 98 |
Exports:fitmodfnCreateEPPFixParfnCreateEPPSubpopsfnCreateLikDatfnCreateParamfnPregPrevfnPrepareHHSLikDataIMISincidllprepare_ancrtcens_likdatprepare_epp_fitprevread_epp_dataread_epp_inputread_epp_subpopsread_sptread_spusimfitsimmodupdate.eppfp
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Parse java array from EPP .xml file | .parse_array |
| Parse java matrix from EPP .xml file | .parse_matrix |
| Return workset with names from EPP .xml file | get_eppxml_workset |
| Prepare site-level ANC prevalence data for EPP random-effects likelihood | prepare_ancsite_likdat |
| Read EPP fitting surveillance data | read_epp_data |
| Read EPP subpopulation configuration | read_epp_subpops |
| Read EPP Workset Options | read_epp_workset_options |
| Read Bayesian Median outputs from XML | read_eppxml_results |
