Package: malariaEquilibrium 1.0.1
malariaEquilibrium: Return equilibrium solution to malaria transmission model
Often we are interested in the state of a given malaria transmission model at equibrium. However, some models (e.g. the Griffin et al. 2014 model) are quite complex, and can result in equilibrium solutions that are fairly in-depth. In these situations it is useful to have a "canonical" equilibrium solution that is tried and tested, and can be used reliably by multiple users. This package aims to be a place for hosting these canonical solutions, and for storing useful tests, checks and plotting functions for exploring a given solution.
Authors:
malariaEquilibrium_1.0.1.tar.gz
malariaEquilibrium_1.0.1.zip(r-4.7)malariaEquilibrium_1.0.1.zip(r-4.6)malariaEquilibrium_1.0.1.zip(r-4.5)
malariaEquilibrium_1.0.1.tgz(r-4.6-any)malariaEquilibrium_1.0.1.tgz(r-4.5-any)
malariaEquilibrium_1.0.1.tar.gz(r-4.7-any)malariaEquilibrium_1.0.1.tar.gz(r-4.6-any)
malariaEquilibrium_1.0.1.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
malariaEquilibrium/json (API)
| # Install 'malariaEquilibrium' in R: |
| install.packages('malariaEquilibrium', repos = c('https://mrc-ide.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mrc-ide/malariaequilibrium/issues
Last updated from:c929c1c2e3 (on master). Checks:7 NOTE, 2 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | NOTE | 98 | ||
| source / vignettes | OK | 149 | ||
| linux-release-x86_64 | NOTE | 92 | ||
| macos-release-arm64 | NOTE | 80 | ||
| macos-oldrel-arm64 | NOTE | 63 | ||
| windows-devel | NOTE | 76 | ||
| windows-release | NOTE | 56 | ||
| windows-oldrel | NOTE | 66 | ||
| wasm-release | OK | 84 |
Exports:%>%gq_normalhuman_equilibriumhuman_equilibrium_no_hetload_parameter_setmalariaEq_file
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Gaussian quadrature of normal density | gq_normal |
| Equilibrium solution | human_equilibrium |
| Equilibrium solution without biting heterogeneity | human_equilibrium_no_het |
| Laod a Parameter Set from File | load_parameter_set |
| Load sytem file for this package | malariaEq_file |
| malariaEquilibrium | malariaEquilibrium |
