Package: malariasimulation 2.0.2
malariasimulation: An individual based model for malaria
Specifies the latest and greatest malaria model.
Authors:
malariasimulation_2.0.2.tar.gz
malariasimulation_2.0.2.zip(r-4.5)malariasimulation_2.0.2.zip(r-4.4)malariasimulation_2.0.2.zip(r-4.3)
malariasimulation_2.0.2.tgz(r-4.5-x86_64)malariasimulation_2.0.2.tgz(r-4.5-arm64)malariasimulation_2.0.2.tgz(r-4.4-x86_64)malariasimulation_2.0.2.tgz(r-4.4-arm64)malariasimulation_2.0.2.tgz(r-4.3-x86_64)malariasimulation_2.0.2.tgz(r-4.3-arm64)
malariasimulation_2.0.2.tar.gz(r-4.5-noble)malariasimulation_2.0.2.tar.gz(r-4.4-noble)
malariasimulation_2.0.2.tgz(r-4.4-emscripten)malariasimulation_2.0.2.tgz(r-4.3-emscripten)
malariasimulation.pdf |malariasimulation.html✨
malariasimulation/json (API)
NEWS
# Install 'malariasimulation' in R: |
install.packages('malariasimulation', repos = c('https://mrc-ide.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/mrc-ide/malariasimulation/issues
- parameter_draws_pf - Parameter draws
- parameter_draws_pv - Parameter draws
- parasite_parameters - Parasite parameters
Last updated 8 days agofrom:b13c24e124 (on master). Checks:1 OK, 10 NOTE. Indexed: yes.
Target | Result | Latest binary |
---|---|---|
Doc / Vignettes | OK | Feb 17 2025 |
R-4.5-win-x86_64 | NOTE | Feb 17 2025 |
R-4.5-mac-x86_64 | NOTE | Feb 17 2025 |
R-4.5-mac-aarch64 | NOTE | Feb 17 2025 |
R-4.5-linux-x86_64 | NOTE | Feb 17 2025 |
R-4.4-win-x86_64 | NOTE | Feb 17 2025 |
R-4.4-mac-x86_64 | NOTE | Feb 17 2025 |
R-4.4-mac-aarch64 | NOTE | Feb 17 2025 |
R-4.3-win-x86_64 | NOTE | Feb 17 2025 |
R-4.3-mac-x86_64 | NOTE | Feb 17 2025 |
R-4.3-mac-aarch64 | NOTE | Feb 17 2025 |
Exports:AL_paramsarab_paramsCQ_params_vivaxCQ_PQ_params_vivaxCQ_TQ_params_vivaxcreate_pev_profileDHA_PQP_paramsfun_paramsgamb_paramsget_correlation_parametersget_init_carrying_capacityget_parameterskol_paramsparameterise_mosquito_equilibriumparameterise_total_Mpeak_season_offsetr21_booster_profiler21_profilertss_booster_profilertss_profilerun_metapop_simulationrun_resumable_simulationrun_simulationrun_simulation_with_repetitionsset_antimalarial_resistanceset_bednetsset_carrying_capacityset_clinical_treatmentset_demographyset_drugsset_epi_outputsset_equilibriumset_mass_pevset_mdaset_parameter_drawset_pev_episet_pmcset_smcset_speciesset_sprayingset_tbvSP_AQ_paramssteph_params
Dependencies:BHbriocallrclicrayondescdiffobjdigestdqrngevaluatefsgluehmsindividualjsonlitelifecyclemagrittrmalariaEquilibriummalariaEquilibriumVivaxMASSpkgbuildpkgconfigpkgloadpraiseprettyunitsprocessxprogresspsR6Rcpprlangrprojrootsitmostatmodtestthatvctrswaldowithr
Antimalarial Resistance
Rendered fromAntimalarial_Resistance.Rmd
usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2024-09-12
Demography
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on Feb 17 2025.Last update: 2024-09-12
Started: 2022-02-11
Mass Drug Administriation and Chemoprevention
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usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2020-09-01
Matching EIR to PfPR~2-10~
Rendered fromEIRprevmatch.Rmd
usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2021-11-01
Metapopulation
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usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2022-08-08
Model Introduction
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on Feb 17 2025.Last update: 2024-09-12
Started: 2020-06-11
Modifying the carrying capacity
Rendered fromCarrying-capacity.Rmd
usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2023-07-03
Mosquito species
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usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2023-07-03
P. vivax Model
Rendered fromPlasmodium_vivax.Rmd
usingknitr::rmarkdown
on Feb 17 2025.Last update: 2025-02-13
Started: 2025-02-13
Parameter Variation
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on Feb 17 2025.Last update: 2024-09-12
Started: 2023-07-03
Stochastic Variation
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usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2021-11-01
Treatment
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usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2020-08-13
Vaccines
Rendered fromVaccines.Rmd
usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2020-09-01
Vector Control: Bed nets
Rendered fromVectorControl_Bednets.Rmd
usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2023-07-03
Vector Control: Indoor Residual Spraying
Rendered fromVectorControl_IRS.Rmd
usingknitr::rmarkdown
on Feb 17 2025.Last update: 2024-09-12
Started: 2023-07-03