Package: mpoxseir 0.2.28

Lilith Whittles

mpoxseir: Stochastic compartmental model of mpox transmission

Stochastic compartmental model of mpox transmission in odin.dust.

Authors:Lilith Whittles [aut, cre], Ruth McCabe [aut], Charlie Whittaker [aut], Ed Knock [aut], Kieran Chopra [aut], Imperial College of Science, Technology and Medicine [cph]

mpoxseir_0.2.28.tar.gz
mpoxseir_0.2.28.zip(r-4.7)mpoxseir_0.2.28.zip(r-4.6)mpoxseir_0.2.28.zip(r-4.5)
mpoxseir_0.2.28.tgz(r-4.6-x86_64)mpoxseir_0.2.28.tgz(r-4.6-arm64)mpoxseir_0.2.28.tgz(r-4.5-x86_64)mpoxseir_0.2.28.tgz(r-4.5-arm64)
mpoxseir_0.2.28.tar.gz(r-4.7-arm64)mpoxseir_0.2.28.tar.gz(r-4.7-x86_64)mpoxseir_0.2.28.tar.gz(r-4.6-arm64)mpoxseir_0.2.28.tar.gz(r-4.6-x86_64)
mpoxseir_0.2.28.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
mpoxseir/json (API)

# Install 'mpoxseir' in R:
install.packages('mpoxseir', repos = c('https://mrc-ide.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mrc-ide/mpoxseir/issues

Uses libs:
  • c++– GNU Standard C++ Library v3
  • openmp– GCC OpenMP (GOMP) support library

On CRAN:

Conda:

cppopenmp

3.15 score 4 stars 10 scripts 11 exports 25 dependencies

Last updated from:9230f22357 (on main). Checks:11 NOTE, 2 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64NOTE230
linux-devel-x86_64NOTE213
source / vignettesOK364
linux-release-arm64NOTE224
linux-release-x86_64NOTE221
macos-release-arm64NOTE203
macos-release-x86_64NOTE361
macos-oldrel-arm64NOTE184
macos-oldrel-x86_64NOTE508
windows-develNOTE283
windows-releaseNOTE273
windows-oldrelNOTE258
wasm-releaseOK203

Exports:as_dateas_mpoxseir_dateget_age_binsget_compartment_indicesmodel_targeted_vaxmpoxseir_datempoxseir_date_as_dateparameters_demographicparameters_fixedrun_mpoxSEIR_targetedVax_multiplerun_mpoxSEIR_targetedVax_single

Dependencies:clicpp11dplyrdust2genericsgluelifecyclemagrittrmontypillarpkgconfigplyrpurrrR6Rcpprlangsquirestringistringrtibbletidyrtidyselectutf8vctrswithr